PISM, A Parallel Ice Sheet Model
stable v2.1-1-g6902d5502 committed by Ed Bueler on 2023-12-20 08:38:27 -0800
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Namespaces | |
array | |
atmosphere | |
Atmosphere models and modifiers: provide precipitation and temperature to a surface::SurfaceModel below. | |
bed | |
Bed-related models: bed deformation (provide bed elevation and uplift) and (soon) bed erosion. | |
calving | |
Calving and iceberg removal code. | |
details | |
diagnostics | |
energy | |
Energy balance models and utilities. | |
fct | |
fem | |
frontalmelt | |
Frontal melt models and modifiers. | |
grid | |
hydrology | |
Sub-glacial hydrology models and related diagnostics. | |
icebin | |
inverse | |
Inverse modeling code. | |
io | |
Input and output code (NetCDF wrappers, etc) | |
mask | |
ocean | |
Ocean models and modifiers: provide sea level elevation, melange back pressure, shelf base mass flux and shelf base temperature. | |
options | |
Utilities for processing command-line options. | |
petsc | |
Wrappers for some PETSc objects (these wrappers simplify memory management). | |
python | |
Code added for use in Python wrappers. | |
rheology | |
Ice flow laws. | |
stencils | |
stressbalance | |
Stress balance models and related diagnostics. | |
surface | |
Surface models and modifiers: provide top-surface temperature, mass flux, liquid water fraction, mass and thickness of the surface layer. | |
taoutil | |
TAO (inverse modeling) utilities. | |
units | |
uno | |
Classes | |
class | AgeColumnSystem |
Tridiagonal linear system for vertical column of age (pure advection) problem. More... | |
class | AgeModelInputs |
class | AgeModel |
class | Isochrones |
class | IceBasalResistancePlasticLaw |
Class containing physical constants and the constitutive relation describing till for SSA. More... | |
class | IceBasalResistancePseudoPlasticLaw |
class | IceBasalResistanceRegularizedLaw |
class | ConstantYieldStress |
class | MohrCoulombPointwise |
class | MohrCoulombYieldStress |
PISM's default basal yield stress model which applies the Mohr-Coulomb model of deformable, pressurized till. More... | |
class | OptTillphiYieldStress |
Iterative optimization of the till friction angle. More... | |
class | YieldStressInputs |
class | YieldStress |
The PISM basal yield stress model interface (virtual base class) More... | |
class | FrontalMeltInputs |
struct | ForcingOptions |
class | PCFactory |
class | FractureDensity |
class | FrontRetreat |
class | PrescribedRetreat |
class | Geometry |
class | GeometryEvolution |
class | RegionalGeometryEvolution |
struct | Point |
class | MPDATA2 |
class | UNO |
class | IceEISModel |
Derived class for doing EISMINT II simplified geometry experiments. More... | |
class | IceModel |
class | CHTemperature |
Report temperature of the cryo-hydrologic system. More... | |
class | CHLiquidWaterFraction |
Report liquid water fraction in the cryo-hydrologic system. More... | |
class | CHHeatFlux |
Report rate of cryo-hydrologic warming. More... | |
class | IceRegionalModel |
A version of the PISM core class (IceModel) which knows about the no_model_mask and its semantics. More... | |
class | RegionalYieldStress |
class | DataAccess |
class | SNESProblem |
struct | CFLData |
class | PetscAccessible |
class | ColumnInterpolation |
class | TridiagonalSystem |
Virtual base class. Abstracts a tridiagonal system to solve in a column of ice and/or bedrock. More... | |
class | columnSystemCtx |
Base class for tridiagonal systems in the ice. More... | |
struct | InputOptions |
class | Component |
A class defining a common interface for most PISM sub-models. More... | |
class | NetCDFConfig |
A class for reading, writing and accessing PISM configuration flags and parameters. More... | |
class | DefaultConfig |
Default PISM configuration database: uses NetCDF files; can be initialized from a file specified using a command-line option. More... | |
class | Config |
A class for storing and accessing PISM configuration flags and parameters. More... | |
class | ConfigWithPrefix |
class | ConfigJSON |
The JSON-based Config implementation. More... | |
class | Context |
class | Diagnostic |
Class representing diagnostic computations in PISM. More... | |
class | DiagWithDedicatedStorage |
class | Diag |
A template derived from Diagnostic, adding a "Model". More... | |
class | DiagAverageRate |
class | TSDiagnostic |
PISM's scalar time-series diagnostics. More... | |
class | TSSnapshotDiagnostic |
Scalar diagnostic reporting a snapshot of a quantity modeled by PISM. More... | |
class | TSRateDiagnostic |
Scalar diagnostic reporting the rate of change of a quantity modeled by PISM. More... | |
class | TSFluxDiagnostic |
Scalar diagnostic reporting a "flux". More... | |
class | TSDiag |
class | EnthalpyConverter |
Converts between specific enthalpy and temperature or liquid content. More... | |
class | ColdEnthalpyConverter |
An EnthalpyConverter for use in verification tests. More... | |
class | ErrorLocation |
class | RuntimeError |
class | ParallelSection |
struct | Vector3 |
class | FFTWArray |
struct | OwnershipRanges |
class | PointsWithGhosts |
class | Points |
class | Grid |
Describes the PISM grid and the distribution of data across processors. More... | |
class | Interpolation |
struct | VariableLookupData |
class | File |
High-level PISM I/O class. More... | |
class | LocalInterpCtx |
class | Logger |
A basic logging class. More... | |
class | StringLogger |
A logger that accumulates messages and reports them as a string. More... | |
class | GeometryCalculator |
class | MaxTimestep |
Combines the max. time step with the flag indicating if a restriction is active. Makes is possible to use the less-than operator (and std::min , etc) to choose the stricter of two restrictions. More... | |
class | Poisson |
class | Profiling |
class | Proj |
A wrapper for PJ that makes sure pj_destroy is called. More... | |
class | MappingInfo |
class | LonLatCalculator |
class | ScalarForcing |
class | TerminationReason |
class | KSPTerminationReason |
class | SNESTerminationReason |
class | GenericTerminationReason |
class | Time |
Time management class. More... | |
class | ConstAttribute |
class | Attribute |
class | VariableMetadata |
class | SpatialVariableMetadata |
Spatial NetCDF variable (corresponding to a 2D or 3D scalar field). More... | |
class | Vars |
A class for passing PISM variables from the core to other parts of the code (such as climate couplers). More... | |
class | Vector2d |
This class represents a 2D vector field (such as ice velocity) at a certain grid point. More... | |
class | Wrapper |
class | rgrid |
Class used initTestL() in generating sorted list for ODE solver. More... | |
struct | rgridReverseSort |
Comparison used initTestL() in generating sorted list for ODE solver. More... | |
class | IceCompModel |
struct | TestPParameters |
struct | TestFGParameters |
Typedefs | |
typedef stencils::Box< double > | Box |
typedef std::map< std::string, std::vector< VariableMetadata > > | Metadata |
typedef SNESProblem< 1, double > | SNESScalarProblem |
typedef SNESProblem< 2, Vector2d > | SNESVectorProblem |
typedef std::map< std::string, Diagnostic::Ptr > | DiagnosticList |
typedef std::map< std::string, TSDiagnostic::Ptr > | TSDiagnosticList |
Enumerations | |
enum | UNOType { PISM_UNO_UPWIND1 , PISM_UNO_LAX_WENDROFF , PISM_UNO_FROMM , PISM_UNO_2 , PISM_UNO_3 } |
enum | IceModelTerminationReason { PISM_DONE , PISM_CHEKPOINT , PISM_SIGNAL } |
enum | AccessType { GHOSTED , NOT_GHOSTED } |
enum | InitializationType { INIT_RESTART , INIT_BOOTSTRAP , INIT_OTHER } |
enum | ConfigSettingFlag { CONFIG_DEFAULT = 0 , CONFIG_FORCE = 1 , CONFIG_USER = 2 } |
Flag used by set_...() methods. More... | |
enum | InterpolationType : int { LINEAR , NEAREST , PIECEWISE_CONSTANT } |
enum | AxisType : int { T_AXIS = 0 , X_AXIS = 1 , Y_AXIS = 2 , Z_AXIS = 3 , UNKNOWN_AXIS = 4 } |
enum | LoggerLevel { WARNING =1 , DEBUG2 =2 , DEBUG3 =3 , TRACE =4 } |
enum | MaskValue { MASK_UNKNOWN = -1 , MASK_ICE_FREE_BEDROCK = 0 , MASK_GROUNDED = 2 , MASK_FLOATING = 3 , MASK_ICE_FREE_OCEAN = 4 } |
enum | NodeType { NODE_INTERIOR = -1 , NODE_BOUNDARY = 0 , NODE_EXTERIOR = 1 } |
enum | LonLat { LONGITUDE , LATITUDE } |
enum | Direction { North = 0 , East , South , West } |
Functions | |
static void | check_input (const array::Array *ptr, const char *name) |
static double | square (double x) |
template<class M > | |
void | init_step (M *model, const Geometry &geometry, const Time &time) |
void | lapse_rate_correction (const array::Scalar &surface, const array::Scalar &reference_surface, double lapse_rate, array::Scalar &result) |
void | remove_narrow_tongues (const Geometry &geometry, array::Scalar &ice_thickness) |
void | make_nonnegative_preserving (double dt, const array::Scalar1 &x, const array::Staggered1 &flux, array::Staggered &result) |
void | ice_bottom_surface (const Geometry &geometry, array::Scalar &result) |
double | ice_volume (const Geometry &geometry, double thickness_threshold) |
Computes the ice volume, in m^3. More... | |
double | ice_volume_not_displacing_seawater (const Geometry &geometry, double thickness_threshold) |
double | ice_area (const Geometry &geometry, double thickness_threshold) |
Computes ice area, in m^2. More... | |
double | ice_area_grounded (const Geometry &geometry, double thickness_threshold) |
Computes grounded ice area, in m^2. More... | |
double | ice_area_floating (const Geometry &geometry, double thickness_threshold) |
Computes floating ice area, in m^2. More... | |
double | sea_level_rise_potential (const Geometry &geometry, double thickness_threshold) |
Computes the sea level rise that would result if all the ice were melted. More... | |
void | set_no_model_strip (const Grid &grid, double width, array::Scalar &result) |
Set no_model_mask variable to have value 1 in strip of width 'strip' m around edge of computational domain, and value 0 otherwise. More... | |
static double | limit_advective_flux (int current, int neighbor, double input) |
static double | limit_diffusive_flux (int current, int neighbor, double flux) |
static double | effective_change (double H, double dH) |
void | grounding_line_flux (const array::CellType1 &cell_type, const array::Staggered1 &flux, double dt, bool add_values, array::Scalar &output) |
double | total_grounding_line_flux (const array::CellType1 &cell_type, const array::Staggered1 &flux, double dt) |
static double | triangle_area (const Point &a, const Point &b, const Point &c) |
Point | intersect_ab (double a, double b) |
Point | intersect_bc (double b, double c) |
Point | intersect_ac (double a, double c) |
bool | invalid (const Point &p) |
static bool | same (const Point &a, const Point &b) |
double | grounded_area_fraction (double a, double b, double c) |
static double | F (double SL, double B, double H, double alpha) |
static Box | F (const Box &SL, const Box &B, const Box &H, double alpha) |
void | compute_grounded_cell_fraction (double ice_density, double ocean_density, const array::Scalar1 &sea_level, const array::Scalar1 &ice_thickness, const array::Scalar1 &bed_topography, array::Scalar &result) |
static void | compute_interface_velocity (const array::CellType &cell_type, const array::Vector &velocity, array::Staggered &result) |
static void | compute_corrective_velocity (double dt, const array::Staggered &velocity, const array::Scalar2 &x, array::Staggered &result) |
static double | upwind (double x, double x_n, double u) |
static void | step (double dt, const array::Staggered1 &velocity, const array::Scalar1 &x_old, array::Scalar &x) |
double | part_grid_threshold_thickness (stencils::Star< int > cell_type, stencils::Star< double > ice_thickness, stencils::Star< double > surface_elevation, double bed_elevation) |
Compute threshold thickness used when deciding if a partially-filled cell should be considered 'full'. More... | |
static void | step (double dt, const array::Staggered1 &flux, const array::Scalar &x_old, array::Scalar &result) |
static void | print_diagnostics (const Logger &log, const Metadata &list) |
static void | print_diagnostics_json (const Logger &log, const Metadata &list) |
static Metadata | diag_metadata (const std::map< std::string, Diagnostic::Ptr > &diags) |
static Metadata | ts_diag_metadata (const std::map< std::string, TSDiagnostic::Ptr > &ts_diags) |
void | bedrock_surface_temperature (const array::Scalar &sea_level, const array::CellType &cell_type, const array::Scalar &bed_topography, const array::Scalar &ice_thickness, const array::Scalar &basal_enthalpy, const array::Scalar &ice_surface_temperature, array::Scalar &result) |
Compute the temperature seen by the top of the bedrock thermal layer. More... | |
void | generate_trough_topography (array::Scalar &result) |
void | generate_mound_topography (array::Scalar &result) |
void | warn_about_missing (const Logger &log, const std::set< std::string > &vars, const std::string &type, const std::set< std::string > &available, bool stop) |
void | write_mapping (const File &file, const pism::MappingInfo &info) |
void | write_run_stats (const File &file, const pism::VariableMetadata &stats) |
MaxTimestep | reporting_max_timestep (const std::vector< double > ×, double t, double eps, const std::string &description) |
static std::set< std::string > | process_extra_shortcuts (const Config &config, const std::set< std::string > &input) |
static std::set< std::string > | process_ts_shortcuts (const Config &config, const std::set< std::string > &input) |
unsigned int | count_CFL_violations (const array::Array3D &u3, const array::Array3D &v3, const array::Scalar &ice_thickness, double dt) |
Because of the -skip mechanism it is still possible that we can have CFL violations: count them. More... | |
static void | validate_range (const std::string &axis, const std::vector< double > &x, double x_min, double x_max) |
static void | subset_extent (const std::string &axis, const std::vector< double > &x, double x_min, double x_max, double &x0, double &Lx, unsigned int &Mx) |
std::shared_ptr< Grid > | regional_grid_from_options (std::shared_ptr< Context > ctx) |
Create a grid using command-line options and (possibly) an input file. More... | |
static void | set_no_model_yield_stress (double tauc, const array::Scalar &mask, array::Scalar &basal_yield_stress) |
static double | secondInvariant_2D (const Vector2d &U_x, const Vector2d &U_y) |
double | grid_z (double b, double H, int Mz, int k) |
DMDALocalInfo | grid_transpose (const DMDALocalInfo &input) |
PetscErrorCode | setup_level (DM dm, int mg_levels) |
PetscErrorCode | create_restriction (DM fine, DM coarse, const char *dm_name) |
Create the restriction matrix. More... | |
PetscErrorCode | restrict_data (DM fine, DM coarse, const char *dm_name) |
Restrict model parameters from the fine grid onto the coarse grid. More... | |
Vector2d | blatter_xy_exact (double x, double y) |
Vector2d | blatter_xy_source (double x, double y, double B) |
Vector2d | blatter_xz_exact (double x, double z, double A, double rho, double g, double s_0, double alpha, double H, double beta) |
Vector2d | blatter_xz_source (double x, double z, double A, double rho, double g, double s_0, double alpha, double H, double beta) |
Vector2d | blatter_xz_source_bed (double x, double z, double A, double rho, double g, double s_0, double alpha, double H, double beta) |
Vector2d | blatter_xz_source_surface (double x, double z, double A, double rho, double g, double s_0, double alpha, double H, double beta) |
Vector2d | blatter_xz_cfbc_exact (double x, double z, double B, double L, double rho_i, double rho_w, double g) |
Vector2d | blatter_xz_cfbc_source (double x, double z, double L, double rho_i, double rho_w, double g) |
Vector2d | blatter_xz_cfbc_surface (double x, double L, double rho_i, double rho_w, double g) |
Vector2d | blatter_xz_cfbc_base (double x, double L, double rho_i, double rho_w, double g) |
Vector2d | blatter_xz_halfar_exact (double x, double z, double H_0, double R_0, double rho_i, double g, double B) |
Vector2d | blatter_xz_halfar_source (double x, double z, double H_0, double R_0, double rho_i, double g, double B) |
Vector2d | blatter_xz_halfar_source_lateral (double x, double z, double H_0, double R_0, double rho_i, double g, double B) |
Vector2d | blatter_xz_halfar_source_surface (double x, double H_0, double R_0, double rho_i, double g, double B) |
Vector2d | blatter_xz_halfar_source_base (double x, double H_0, double R_0, double rho_i, double g, double B) |
double | blatter_xz_vanderveen_thickness (double x, double alpha, double H_0, double Q_0, double rho_i, double g, double B) |
Vector2d | blatter_xz_vanderveen_exact (double x, double alpha, double H_0, double Q_0, double rho_i, double g, double B) |
Vector2d | blatter_xz_vanderveen_source_lateral (double x, double alpha, double H_0, double Q_0, double rho_i, double g, double B) |
Vector2d | blatter_xz_vanderveen_source_surface (double x, double alpha, double H_0, double Q_0, double rho_i, double g, double B) |
double | blatter_xz_vanderveen_beta (double x, double alpha, double H_0, double Q_0, double rho_i, double g, double B) |
static void | compute_strain_heating_errors (const array::Array3D &strain_heating, const array::Scalar &thickness, const Grid &grid, double &gmax_strain_heating_err, double &gav_strain_heating_err) |
static void | computeSurfaceVelocityErrors (const Grid &grid, const array::Scalar &ice_thickness, const array::Array3D &u3, const array::Array3D &v3, const array::Array3D &w3, double &gmaxUerr, double &gavUerr, double &gmaxWerr, double &gavWerr) |
static void | enthalpy_from_temperature_cold (EnthalpyConverter &EC, const Grid &grid, const array::Scalar &thickness, const array::Array3D &temperature, array::Array3D &enthalpy) |
static void | setInitStateF (Grid &grid, EnthalpyConverter &EC, array::Scalar &bed, array::Scalar &mask, array::Scalar &surface, array::Scalar &thickness, array::Array3D &enthalpy) |
Set the test F initial state. More... | |
static void | reportErrors (const Grid &grid, units::System::Ptr unit_system, const array::Scalar &thickness, const array::Array3D &u_sia, const array::Array3D &v_sia, const array::Array3D &w_sia, const array::Array3D &strain_heating) |
CFLData | max_timestep_cfl_3d (const array::Scalar &ice_thickness, const array::CellType &cell_type, const array::Array3D &u3, const array::Array3D &v3, const array::Array3D &w3) |
Compute the maximum velocities for time-stepping and reporting to user. More... | |
CFLData | max_timestep_cfl_2d (const array::Scalar &ice_thickness, const array::CellType &cell_type, const array::Vector &velocity) |
Compute the CFL constant associated to first-order upwinding for the sliding contribution to mass continuity. More... | |
MaxTimestep | max_timestep_diffusivity (double D_max, double dx, double dy, double adaptive_timestepping_ratio) |
void | convert_vec (petsc::Vec &v, units::System::Ptr system, const std::string &spec1, const std::string &spec2) |
void | convert_vec (petsc::Vec &v, std::shared_ptr< units::System > system, const std::string &spec1, const std::string &spec2) |
static std::vector< unsigned int > | init_interpolation_indexes (const std::vector< double > &z_input, const std::vector< double > &z_output) |
InputOptions | process_input_options (MPI_Comm com, Config::ConstPtr config) |
static bool | string_is_false (const std::string &value) |
static bool | string_is_true (const std::string &value) |
static bool | special_parameter (const std::string &name) |
void | print_config (const Logger &log, int verbosity_threshhold, const Config &config) |
Report configuration parameters to stdout . More... | |
void | print_unused_parameters (const Logger &log, int verbosity_threshhold, const Config &config) |
Report unused configuration parameters to stdout . More... | |
void | set_flag_from_option (Config &config, const std::string &option, const std::string ¶meter_name) |
Get a flag from a command-line option. More... | |
void | set_number_from_option (units::System::Ptr unit_system, Config &config, const std::string &name, const std::string ¶meter) |
Sets a configuration parameter from a command-line option. More... | |
void | set_number_list_from_option (Config &config, const std::string &option, const std::string ¶meter) |
void | set_integer_list_from_option (Config &config, const std::string &option, const std::string ¶meter) |
void | set_integer_from_option (Config &config, const std::string &name, const std::string ¶meter) |
void | set_string_from_option (Config &config, const std::string &option, const std::string ¶meter) |
Set one free-form string parameter using command-line options. More... | |
void | set_keyword_from_option (Config &config, const std::string &name, const std::string ¶meter, const std::string &choices) |
Set a keyword parameter from a command-line option. More... | |
void | set_parameter_from_options (units::System::Ptr unit_system, Config &config, const std::string &name) |
Set one parameter using command-line options. More... | |
void | set_config_from_options (units::System::Ptr unit_system, Config &config) |
Set configuration parameters using command-line options. More... | |
Config::Ptr | config_from_options (MPI_Comm com, const Logger &log, units::System::Ptr unit_system) |
Create a configuration database using command-line options. More... | |
static json_t * | find_json_value (json_t *root, const std::string &name) |
static json_t * | pack_json_array (const std::vector< double > &data) |
std::vector< double > | unpack_json_array (const char *name, const json_t *input) |
template<typename PISMType , typename TMPType > | |
static void | get_all_values (json_t *root, const std::string &path, int type, const char *fmt, std::map< std::string, PISMType > &accum) |
static void | get_all_arrays (json_t *root, const std::string &path, std::map< std::string, std::vector< double > > &accum) |
template<typename PISMType , typename TMPType > | |
static PISMType | get_value (json_t *object, const std::string &name, const char *fmt, const char *type_name) |
static void | set_value (json_t *data, const std::string &name, json_t *value) |
std::shared_ptr< Context > | context_from_options (MPI_Comm com, const std::string &prefix, bool print=false) |
Create a default context using options. More... | |
void | handle_fatal_errors (MPI_Comm com) |
void | check_c_call (int errcode, int success, const char *function_name, const char *file, int line) |
void | check_petsc_call (int errcode, const char *function_name, const char *file, int line) |
std::vector< double > | fftfreq (int M, double normalization) |
void | clear_fftw_array (fftw_complex *input, int Nx, int Ny) |
Fill input with zeros. More... | |
void | copy_fftw_array (fftw_complex *source, fftw_complex *destination, int Nx, int Ny) |
Copy source to destination . More... | |
void | set_real_part (petsc::Vec &input, double normalization, int Mx, int My, int Nx, int Ny, int i0, int j0, fftw_complex *output) |
void | get_real_part (fftw_complex *input, double normalization, int Mx, int My, int Nx, int Ny, int i0, int j0, petsc::Vec &output) |
Get the real part of input and put it in output. More... | |
static std::shared_ptr< Grid > | Grid_FromFile (std::shared_ptr< const Context > ctx, const File &file, const std::string &var_name, grid::Registration r) |
Create a grid from a file, get information from variable var_name . More... | |
static void | compute_nprocs (unsigned int Mx, unsigned int My, unsigned int size, unsigned int &Nx, unsigned int &Ny) |
Computes the number of processors in the X- and Y-directions. More... | |
static std::vector< unsigned int > | ownership_ranges (unsigned int Mx, unsigned int Nx) |
Computes processor ownership ranges corresponding to equal area distribution among processors. More... | |
static OwnershipRanges | compute_ownership_ranges (unsigned int Mx, unsigned int My, unsigned int size) |
static double | compute_horizontal_spacing (double half_width, unsigned int M, bool cell_centered) |
Compute horizontal grid spacing. See compute_horizontal_coordinates() for more. More... | |
static std::vector< double > | compute_coordinates (unsigned int M, double delta, double v_min, double v_max, bool cell_centered) |
Compute grid coordinates for one direction (X or Y). More... | |
static std::map< size_t, double > | weights_piecewise_constant (const double *x, size_t x_size, double a, double b) |
static std::map< size_t, double > | weights_piecewise_linear (const double *x, size_t x_size, double a, double b) |
std::map< size_t, double > | integration_weights (const double *x, size_t x_size, InterpolationType type, double a, double b) |
std::map< size_t, double > | integration_weights (const std::vector< double > &x, InterpolationType type, double a, double b) |
io::Backend | string_to_backend (const std::string &backend) |
static std::string | backend_to_string (io::Backend backend) |
static io::Backend | choose_backend (MPI_Comm com, const std::string &filename) |
static io::NCFile::Ptr | create_backend (MPI_Comm com, io::Backend backend, int iosysid) |
AxisType | axis_type_from_string (const std::string &input) |
static void | subset_start_and_count (const std::vector< double > &x, double subset_x_min, double subset_x_max, int &x_start, int &x_count) |
Compute start and count for getting a subset of x. More... | |
static nc_type | pism_type_to_nc_type (pism::io::Type input) |
static pism::io::Type | nc_type_to_pism_type (int input) |
void | label_components (array::Scalar &mask, petsc::Vec &mask_p0, bool identify_icebergs, double mask_grounded) |
void | label_components (array::Scalar &mask, bool identify_icebergs, double mask_grounded) |
Logger::Ptr | logger_from_options (MPI_Comm com) |
bool | operator== (const MaxTimestep &a, const MaxTimestep &b) |
Equality operator for MaxTimestep. More... | |
bool | operator< (const MaxTimestep &a, const MaxTimestep &b) |
Less than operator for MaxTimestep. More... | |
bool | operator> (const MaxTimestep &a, const MaxTimestep &b) |
Greater than operator for MaxTimestep. More... | |
void | compute_node_types (const array::Scalar1 &ice_thickness, double thickness_threshold, array::Scalar &result) |
void | show_usage (const Logger &log, const std::string &execname, const std::string &usage) |
Print a usage message. More... | |
bool | show_usage_check_req_opts (const Logger &log, const std::string &execname, const std::vector< std::string > &required_options, const std::string &usage) |
In a single call a driver program can provide a usage string to the user and check if required options are given, and if not, end. More... | |
std::string | string_strip (const std::string &input) |
bool | ends_with (const std::string &str, const std::string &suffix) |
Returns true if str ends with suffix and false otherwise. More... | |
template<class T > | |
std::string | join_impl (const T &input, const std::string &separator) |
std::string | join (const std::vector< std::string > &strings, const std::string &separator) |
Concatenate strings , inserting separator between elements. More... | |
std::string | set_join (const std::set< std::string > &input, const std::string &separator) |
std::string | replace_character (const std::string &input, char from, char to) |
std::vector< std::string > | split (const std::string &input, char separator) |
Transform a separator -separated list (a string) into a vector of strings. More... | |
std::set< std::string > | set_split (const std::string &input, char separator) |
Transform a separator -separated list (a string) into a set of strings. More... | |
bool | is_increasing (const std::vector< double > &a) |
Checks if a vector of doubles is strictly increasing. More... | |
bool | member (const std::string &string, const std::set< std::string > &set) |
void | GlobalReduce (MPI_Comm comm, double *local, double *result, int count, MPI_Op op) |
void | GlobalReduce (MPI_Comm comm, int *local, int *result, int count, MPI_Op op) |
void | GlobalMin (MPI_Comm comm, double *local, double *result, int count) |
void | GlobalMax (MPI_Comm comm, double *local, double *result, int count) |
void | GlobalMax (MPI_Comm comm, int *local, int *result, int count) |
void | GlobalSum (MPI_Comm comm, double *local, double *result, int count) |
void | GlobalSum (MPI_Comm comm, int *local, int *result, int count) |
unsigned int | GlobalSum (MPI_Comm comm, unsigned int input) |
int | GlobalSum (MPI_Comm comm, int input) |
double | GlobalMin (MPI_Comm comm, double local) |
double | GlobalMax (MPI_Comm comm, double local) |
double | GlobalSum (MPI_Comm comm, double local) |
std::string | version () |
double | wall_clock_hours (MPI_Comm com, double start_time) |
Return time since the beginning of the run, in hours. More... | |
std::string | timestamp (MPI_Comm com) |
Creates a time-stamp used for the history NetCDF attribute. More... | |
std::string | username_prefix (MPI_Comm com) |
Creates a string with the user name, hostname and the time-stamp (for history strings). More... | |
std::string | args_string () |
Uses argc and argv to create the string with current PISM command-line arguments. More... | |
std::string | filename_add_suffix (const std::string &filename, const std::string &separator, const std::string &suffix) |
Adds a suffix to a filename. More... | |
double | get_time (MPI_Comm comm) |
std::string | printf (const char *format,...) |
void | validate_format_string (const std::string &format) |
double | vector_min (const std::vector< double > &input) |
double | vector_max (const std::vector< double > &input) |
uint64_t | fletcher64 (const uint32_t *data, size_t length) |
void | print_checksum (MPI_Comm com, const std::vector< double > &data, const char *label) |
void | print_vector (MPI_Comm com, const std::vector< double > &data, const char *label) |
void | print_vector (MPI_Comm com, const std::vector< int > &data, const char *label) |
double | average_water_column_pressure (double ice_thickness, double bed, double floatation_level, double rho_ice, double rho_water, double g) |
double | parse_number (const std::string &input) |
long int | parse_integer (const std::string &input) |
template<typename T > | |
T | combine (const T &a, const T &b) |
template<typename T > | |
T | clip (T x, T a, T b) |
VariableMetadata | epsg_to_cf (units::System::Ptr system, const std::string &proj_string) |
Return CF-Convention "mapping" variable corresponding to an EPSG code specified in a PROJ string. More... | |
void | check_consistency_epsg (const MappingInfo &info) |
Check consistency of the "mapping" variable with the EPSG code in the proj string. More... | |
MappingInfo | get_projection_info (const File &input_file, const std::string &mapping_name, units::System::Ptr unit_system) |
Get projection info from a file. More... | |
void | compute_cell_areas (const std::string &projection, array::Scalar &result) |
static void | compute_lon_lat (const std::string &projection, LonLat which, array::Scalar &result) |
static void | compute_lon_lat_bounds (const std::string &projection, LonLat which, array::Array3D &result) |
void | compute_longitude (const std::string &projection, array::Scalar &result) |
void | compute_latitude (const std::string &projection, array::Scalar &result) |
void | compute_lon_bounds (const std::string &projection, array::Array3D &result) |
void | compute_lat_bounds (const std::string &projection, array::Array3D &result) |
static void | report_range (const std::vector< double > &data, const units::System::Ptr &unit_system, const VariableMetadata &metadata, const Logger &log) |
Report the range of a time-series stored in data . More... | |
static std::string | reference_date_from_file (const File &file, const std::string &time_name, const std::string &default_value, bool stop_on_error) |
Get the reference date from a file. More... | |
static std::string | calendar_from_file (const File &file, const std::string &time_name, const std::string &default_value, bool stop_on_error) |
Get the calendar name from a file. More... | |
static std::string | reference_date (const File *input_file, const Config &config, const Logger &log) |
static std::string | calendar (const File *input_file, const Config &config, const Logger &log) |
static double | increment_date (const units::Unit &time_units, const std::string &calendar, double T, double years) |
static double | parse_date (const std::string &input, const units::Unit &time_units, const std::string &calendar) |
static double | start_time (const Config &config, const Logger &log, const File *file, const std::string &reference_date, const std::string &calendar, const units::Unit &time_units) |
static double | end_time (const Config &config, double time_start, const std::string &calendar, const units::Unit &time_units) |
void | check_forcing_duration (const Time &time, double forcing_start, double forcing_end) |
bool | pism_is_valid_calendar_name (const std::string &name) |
Vector2d | operator* (const double &a, const Vector2d &v) |
static void | write (units::System::Ptr sys, const File &file, size_t start, const char *name, const char *units, const char *long_name, double value, io::Type type=io::PISM_DOUBLE) |
int | getsb (double r, double *sb, double *dsbdr) |
double | criticalW (double r) |
int | funcP (double r, const double W[], double f[], void *params) |
double | initialconditionW () |
double | psteady (double W, double magvb, double Po) |
int | getW (const double *r, int N, double *W, double EPS_ABS, double EPS_REL, int ode_method) |
int | exactP_list (const double *r, int N, double *h, double *magvb, double *Wcrit, double *W, double *P, double EPS_ABS, double EPS_REL, int ode_method) |
TestPParameters | exactP (const std::vector< double > &r, double EPS_ABS, double EPS_REL, int ode_method) |
static double | p3 (double x) |
static double | p4 (double x) |
TestFGParameters | exactFG (double t, double r, const std::vector< double > &z, double Cp) |
Variables | |
static const char * | land_ice_area_fraction_name = "sftgif" |
static const char * | grounded_ice_sheet_area_fraction_name = "sftgrf" |
static const char * | floating_ice_sheet_area_fraction_name = "sftflf" |
static const int | TEMPORARY_STRING_LENGTH = 32768 |
static const double | SperA = 31556926.0 |
static const double | g = 9.81 |
static const double | rhoi = 910.0 |
static const double | rhow = 1000.0 |
static const double | Aglen = 3.1689e-24 |
static const double | k = (0.01 / (rhow * g)) |
static const double | Wr = 1.0 |
static const double | c1 = 0.500 |
static const double | c2 = 0.040 |
static const double | m0 = ((0.20 / SperA) * rhow) |
static const double | h0 = 500.0 |
static const double | v0 = (100.0 / SperA) |
static const double | R1 = 5000.0 |
This class implements dEBM-simple, the simple diurnal energy balance model described in
M. Zeitz, R. Reese, J. Beckmann, U. Krebs-Kanzow, and R. Winkelmann, “Impact of the melt–albedo feedback on the future evolution of the Greenland Ice Sheet with PISM-dEBM-simple,” The Cryosphere, vol. 15, Art. no. 12, Dec. 2021.
See also
U. Krebs-Kanzow, P. Gierz, and G. Lohmann, “Brief communication: An ice surface melt scheme including the diurnal cycle of solar radiation,” The Cryosphere, vol. 12, Art. no. 12, Dec. 2018.
and chapter 2 of
K. N. Liou, Introduction to Atmospheric Radiation. Elsevier Science & Technology Books, 2002.
This file should contain the class definition and nothing else. Implementations should go in separate files.
References:
[Smolarkiewicz1983] P. K. Smolarkiewicz, “A Simple Positive Definite Advection Scheme with Small Implicit Diffusion,” Monthly Weather Review, vol. 111, Art. no. 3, Mar. 1983.
[Smolarkiewicz1990] P. K. Smolarkiewicz and W. W. Grabowski, “The multidimensional positive definite advection transport algorithm: nonoscillatory option,” Journal of Computational Physics, vol. 86, Art. no. 2, Feb. 1990.
References:
[Li2008] J.-G. Li, “Upstream Nonoscillatory Advection Schemes,” Monthly Weather Review, vol. 136, Art. no. 12, Dec. 2008.
Convert PISM's IO types into NetCDF types and back. Note that NC_* may be macros, so you need to include the appropriate NetCDF header first.